plink association

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plink association

Association analysis. Basic reports, case/control phenotype. --assoc ['perm' | 'mperm='<value>] ['genedrop'] ['perm-count'] [fisher | fisher-midp}] ['counts'] ['set-test ... ,Association analysis. Linear and logistic/Firth regression with covariates. --glm ['zs'] ['omit-ref'] [sex | no-x-sex}] ['log10'] ['pheno-ids'] [genotypic | hethom ... ,跳到 How does PLINK handle the X chromosome in association tests? - How does PLINK handle the X chromosome in association tests? Can/why ... ,assoc.dosage (dosage association analysis report). Produced by --dosage. A text file with a header line, and then usually one line per variant ... , HINT The basic association commands (--assoc, --model, --fisher, --linear and --logistic) will test only a single phenotype. If your alternate ..., PLINK is a free, open-source whole genome association analysis toolset, designed to perform a range of basic, large-scale analyses in a ...,跳到 Association analysis, accounting for clusters - Quantitative trait association analysis; Extracting a SNP of interest. Getting started. Just typing plink and ...

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KiTTY
KiTTY 是從 PuTTY 的 0.60 版本,一個免費的 SSH,Telnet 和 Rlogin 客戶端,將使高級用戶來控制其網絡連接和文件傳輸的所有方面的分叉。 KiTTY 是源代碼可用的開源軟件,由一組志願者開發和支持。會話過濾,會話圖標,自動登錄,自動密碼保護,預定義命令快捷鍵,在遠程會話中運行本地保存的腳本等應用體育功能。KiTTY 的主要工作環境是 DOS 命令界面高級用戶可以使用他... KiTTY 軟體介紹

plink association 相關參考資料
Association analysis - PLINK 1.9 - cog-genomics.org

Association analysis. Basic reports, case/control phenotype. --assoc [&#39;perm&#39; | &#39;mperm=&#39;&lt;value&gt;] [&#39;genedrop&#39;] [&#39;perm-count&#39;] [fisher | fisher-midp}] [&#39;counts&#...

https://www.cog-genomics.org

Association analysis - PLINK 2.0 - cog-genomics.org

Association analysis. Linear and logistic/Firth regression with covariates. --glm [&#39;zs&#39;] [&#39;omit-ref&#39;] [sex | no-x-sex}] [&#39;log10&#39;] [&#39;pheno-ids&#39;] [genotypic | hethom&nbsp...

https://www.cog-genomics.org

FAQ and Hints - PLINK: Whole genome data analysis toolset

跳到 How does PLINK handle the X chromosome in association tests? - How does PLINK handle the X chromosome in association tests? Can/why&nbsp;...

https://zzz.bwh.harvard.edu

File format reference - PLINK 1.9 - cog-genomics.org

assoc.dosage (dosage association analysis report). Produced by --dosage. A text file with a header line, and then usually one line per variant&nbsp;...

https://www.cog-genomics.org

plink --file mydata - PLINK: Whole genome data analysis toolset

HINT The basic association commands (--assoc, --model, --fisher, --linear and --logistic) will test only a single phenotype. If your alternate&nbsp;...

https://zzz.bwh.harvard.edu

PLINK format - PLINK: Whole genome data analysis toolset

PLINK is a free, open-source whole genome association analysis toolset, designed to perform a range of basic, large-scale analyses in a&nbsp;...

https://zzz.bwh.harvard.edu

PLINK tutorial - PLINK: Whole genome data analysis toolset

跳到 Association analysis, accounting for clusters - Quantitative trait association analysis; Extracting a SNP of interest. Getting started. Just typing plink and&nbsp;...

https://zzz.bwh.harvard.edu