plink -- update map
plink --file text_fileset --maf 0.05 --make-bed --out binary_fileset. does the following: ..... --update-map <filename> [bp col. number] [variant ID col.] [skip] ,Variant identifier; Expected allele #1 (from --update-alleles input file) .... Each .chr-*.map file produced by PLINK is a text file with no header line, and one line per ... , UPDATE REQUIRED *** This version : 1.03 Most recent version ... As well as the --file command described above, PED and MAP files can be ..., To automatically update either the genetic or physical positions for some or all SNPs in a dataset, use the --update-map command, which takes ...,This is a comprehensive update to Shaun Purcell's PLINK command-line ... --file triallelic-variant handling bug which occurred when the .map was unsorted. ,This is a comprehensive update to Shaun Purcell's PLINK command-line ... This bug was much more likely to trigger if the first .map file was unsorted, but if you ... , A little bit of digging and I found this: https://www.cog-genomics.org/plink2/ which does the above command in a few seconds. Not sure what the ..., PLINK is a free, open-source whole genome association analysis toolset, designed to perform a range of basic, large-scale analyses in a ..., plink合并文件并更新SNP位置（merge file, update SNP position）. 一、合并文件. plink合并文件需要用到“merge”参数. 如果是ped和map格式文件， ..., --file, plink}, Specify .ped and .map files ... --tfile, plink}, Specify .tped and .tfam files .... --update-chr, Update chromosome codes in a map file.
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 plink -- update map 相關參考資料
Data management - PLINK 1.9 - cog-genomics.org
plink --file text_fileset --maf 0.05 --make-bed --out binary_fileset. does the following: ..... --update-map <filename> [bp col. number] [variant ID col.] [skip] https://www.cog-genomics.org File format reference - PLINK 1.9 - cog-genomics.org
Variant identifier; Expected allele #1 (from --update-alleles input file) .... Each .chr-*.map file produced by PLINK is a text file with no header line, and one line per ... https://www.cog-genomics.org PED files - PLINK: Whole genome data analysis toolset
UPDATE REQUIRED *** This version : 1.03 Most recent version ... As well as the --file command described above, PED and MAP files can be ... http://zzz.bwh.harvard.edu plink --file data --recode - PLINK: Whole genome data analysis ...
To automatically update either the genetic or physical positions for some or all SNPs in a dataset, use the --update-map command, which takes ... http://zzz.bwh.harvard.edu PLINK 1.9 - cog-genomics.org
This is a comprehensive update to Shaun Purcell's PLINK command-line ... --file triallelic-variant handling bug which occurred when the .map was unsorted. https://www.cog-genomics.org PLINK 1.90 beta - cog-genomics.org
This is a comprehensive update to Shaun Purcell's PLINK command-line ... This bug was much more likely to trigger if the first .map file was unsorted, but if you ... https://www.cog-genomics.org plink stalls when using --update-map option - BioStar
A little bit of digging and I found this: https://www.cog-genomics.org/plink2/ which does the above command in a few seconds. Not sure what the ... https://www.biostars.org PLINK: Whole genome data analysis toolset - Shaun Purcell
PLINK is a free, open-source whole genome association analysis toolset, designed to perform a range of basic, large-scale analyses in a ... http://zzz.bwh.harvard.edu plink合并文件并更新SNP位置（merge file, update SNP position ...
plink合并文件并更新SNP位置（merge file, update SNP position）. 一、合并文件. plink合并文件需要用到“merge”参数. 如果是ped和map格式文件， ... https://www.cnblogs.com Reference - PLINK: Whole genome data analysis toolset
--file, plink}, Specify .ped and .map files ... --tfile, plink}, Specify .tped and .tfam files .... --update-chr, Update chromosome codes in a map file. http://zzz.bwh.harvard.edu |