Protein topology
Protein topology is a property of protein molecule that does not change under deformation Topology of beta-strands in Greek-key protein motif. Contents. ,由 DR Westhead 著作 · 1999 · 被引用 166 次 — The topology of a protein structure is a highly simplified description of its fold including only the sequence of secondary structure elements, ... ,Protein fold or topology prediction algorithms determine the three dimensional arrangement of the amino acids from the sequence of the protein. ,由 G von Heijne 著作 · 2006 · 被引用 669 次 — In the world of membrane proteins, topology defines an important halfway house between the amino-acid sequence and the fully folded three-dimensional structure. ,由 Y Levy 著作 · 2004 · 被引用 378 次 — We find that, as in the case of protein folding, the native topology is the major factor that governs the choice of binding mechanism. ,由 ACR Martin 著作 · 2000 · 被引用 99 次 — Abstract. Protein topology can be described at different levels. At the most fundamental level, it is a sequence of secondary structure elements (a `primary ... ,由 J Wang 著作 · 2022 · 被引用 9 次 — The logarithm of the experimental protein folding rate depends on both the local geometry and the topology of the protein's native state. ,由 K Lindorff-Larsen 著作 · 2005 · 被引用 122 次 — These studies show that the topology of the transition state is determined by a set of interactions involving a small number of key residues and, in addition, ... ,由 P Koehl 著作 · 2002 · 被引用 119 次 — We describe a new approach to explore and quantify the sequence space associated with a given protein structure. A set of sequences are optimized for a ... ,It is a database of protein structure topologies modeled as undirected, labeled graphs. It provides a web server to visualize and analyze protein structure ...
| 相關軟體 MBSA 資訊 | |
|---|---|
 Protein topology 相關參考資料
Protein topology
Protein topology is a property of protein molecule that does not change under deformation Topology of beta-strands in Greek-key protein motif. Contents. https://en.wikipedia.org Protein structural topology: Automated analysis and ...
由 DR Westhead 著作 · 1999 · 被引用 166 次 — The topology of a protein structure is a highly simplified description of its fold including only the sequence of secondary structure elements, ... https://www.ncbi.nlm.nih.gov Protein Topology - an overview
Protein fold or topology prediction algorithms determine the three dimensional arrangement of the amino acids from the sequence of the protein. https://www.sciencedirect.com Membrane-protein topology | Nature Reviews Molecular ...
由 G von Heijne 著作 · 2006 · 被引用 669 次 — In the world of membrane proteins, topology defines an important halfway house between the amino-acid sequence and the fully folded three-dimensional struc... https://www.nature.com Protein topology determines binding mechanism
由 Y Levy 著作 · 2004 · 被引用 378 次 — We find that, as in the case of protein folding, the native topology is the major factor that governs the choice of binding mechanism. https://www.pnas.org The ups and downs of protein topology; rapid comparison of ...
由 ACR Martin 著作 · 2000 · 被引用 99 次 — Abstract. Protein topology can be described at different levels. At the most fundamental level, it is a sequence of secondary structure elements (a `primary .... https://academic.oup.com The protein folding rate and the geometry and topology of ...
由 J Wang 著作 · 2022 · 被引用 9 次 — The logarithm of the experimental protein folding rate depends on both the local geometry and the topology of the protein's native state. https://www.nature.com Protein folding and the organization of the protein topology ...
由 K Lindorff-Larsen 著作 · 2005 · 被引用 122 次 — These studies show that the topology of the transition state is determined by a set of interactions involving a small number of key residues and, in a... https://pubmed.ncbi.nlm.nih.go Protein topology and stability define the space of allowed ...
由 P Koehl 著作 · 2002 · 被引用 119 次 — We describe a new approach to explore and quantify the sequence space associated with a given protein structure. A set of sequences are optimized for a ... https://www.pnas.org The Protein Topology Graph Library: PTGLweb -
It is a database of protein structure topologies modeled as undirected, labeled graphs. It provides a web server to visualize and analyze protein structure ... http://ptgl.uni-frankfurt.de |