plink hapmap
Python and R will allow to transpose your data set. very easy in R data <- t(data). Not sure about python. Depends on the data structures your using but let's say ... ,2017年1月25日 — The HapMap genotype data (the latest is release 23) are available here as PLINK binary filesets. The SNPs are currently coded according ... ,2018年6月26日 — ... 的在读硕士研究生。 这一段时间一直被一个问题困扰——怎么将hapmap 格式（.hmp.txt）的芯片数据转为plink 格式（.ped，.map）。为了解… ,2016年11月10日 — PLINK can handle many formats. HapMap format is similar to Transposed PLINK files. I suggest download both types of files and compare? ,I would like to convert my GBS data ( hapmap file) format to plink format. But I do not know how I can do that since it is my first time to handle such kind of data. ,2017年1月25日 — This page describes PLINK functions to impute SNPs that are not directly genotyped but are present on a reference panel such as the HapMap. ,2017年1月25日 — 89 HapMap samples and 80K random SNPs. The first step is to obtain a working copy of PLINK and of the example data files. Make sure you ... ,2020年7月7日 — Hapmap phase 3 data (HapMapIII) is available in PLINK text format at ncbi. In addition, a sample file with information about the individuals' ... ,(See the PLINK 2 Resources page for 1000 Genomes phase 3. ... HapMap phase 2 ... These files were created by Shaun Purcell for PLINK 1.02 (+ gPLINK + ...
| 相關軟體 KiTTY 資訊 | |
|---|---|
 plink hapmap 相關參考資料
Convert Plink Ped Format Into Hapmap Format? - Biostars
Python and R will allow to transpose your data set. very easy in R data <- t(data). Not sure about python. Depends on the data structures your using but let's say ... https://www.biostars.org HapMap (PLINK format)
2017年1月25日 — The HapMap genotype data (the latest is release 23) are available here as PLINK binary filesets. The SNPs are currently coded according ... http://zzz.bwh.harvard.edu Hapmap 格式转plink（.ped, .map）格式- 知乎
2018年6月26日 — ... 的在读硕士研究生。 这一段时间一直被一个问题困扰——怎么将hapmap 格式（.hmp.txt）的芯片数据转为plink 格式（.ped，.map）。为了解… https://zhuanlan.zhihu.com How Do Plink And Hapmap Files Differ? - Biostars
2016年11月10日 — PLINK can handle many formats. HapMap format is similar to Transposed PLINK files. I suggest download both types of files and compare? https://www.biostars.org How to convert hapmap file to plink format. - Biostars
I would like to convert my GBS data ( hapmap file) format to plink format. But I do not know how I can do that since it is my first time to handle such kind of data. https://www.biostars.org PLINK
2017年1月25日 — This page describes PLINK functions to impute SNPs that are not directly genotyped but are present on a reference panel such as the HapMap. http://zzz.bwh.harvard.edu PLINK tutorial - PLINK: Whole genome data analysis toolset
2017年1月25日 — 89 HapMap samples and 80K random SNPs. The first step is to obtain a working copy of PLINK and of the example data files. Make sure you ... https://zzz.bwh.harvard.edu Processing HapMap III reference data for ancestry ... - CRAN
2020年7月7日 — Hapmap phase 3 data (HapMapIII) is available in PLINK text format at ncbi. In addition, a sample file with information about the individuals' ... https://cran.r-project.org Resources - PLINK 1.9 - cog-genomics.org
(See the PLINK 2 Resources page for 1000 Genomes phase 3. ... HapMap phase 2 ... These files were created by Shaun Purcell for PLINK 1.02 (+ gPLINK + ... https://www.cog-genomics.org |